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Domain assignment for ENSRNOP00000015152 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000015152
Domain Number 1 Region: 107-217
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 5.24e-27
Family Canonical RBD 0.0000154
Further Details:      
 
Domain Number 2 Region: 18-105
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.75e-25
Family Canonical RBD 0.00000706
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000015152   Gene: ENSRNOG00000011175   Transcript: ENSRNOT00000015152
Sequence length 352
Comment pep:known chromosome:Rnor_5.0:4:145901254:145907466:-1 gene:ENSRNOG00000011175 transcript:ENSRNOT00000015152 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRS
RGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKE
DTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHN
AEVRKALSRQEMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFG
DGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN
DFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY
Download sequence
Identical sequences F1LNF1 F6VYB1 G5BD43 G7MLM6 G7P0P7
HGL_H00000354021-2 ENSECAP00000001477 ENSRNOP00000015152 ENSRNOP00000015152 ENSMMUP00000004838 ENSECAP00000001477 ENSMMUP00000004838 10116.ENSRNOP00000015152 9544.ENSMMUP00000004838 9796.ENSECAP00000001477

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