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Domain assignment for ENSRNOP00000019689 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000019689
Domain Number 1 Region: 191-293
Classification Level Classification E-value
Superfamily Cyclin-like 8.69e-30
Family Transcription factor IIB (TFIIB), core domain 0.0048
Further Details:      
 
Domain Number 2 Region: 4-49
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.0000000000147
Family Transcriptional factor domain 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000019689   Gene: ENSRNOG00000014595   Transcript: ENSRNOT00000019689
Sequence length 686
Comment pep:known chromosome:RGSC3.4:6:137962953:138007641:-1 gene:ENSRNOG00000014595 transcript:ENSRNOT00000019689 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTGRVCRGCGGTDIELDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSL
DGAGKTPTLGGGFHVNLGKESRAQTLQNGILYFILADHGVGQDAGVGAAPHPPPGEPVAT
EPALPGHSLQLLQDGCKQASYPRTENGPCDCCLPLLDMLLDLSDLLQVNVYVLGKTFLLL
ARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCG
AALLVAARMHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECD
PPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISTYQDAIEIELENSRPKAKGALANLSKDG
SGEDATSSPFCEEDTEDEELEAAASHMNKDFYRELLGADGGSEAAEDADGGSRPLALESL
LGPLPTAASLGISDSIRECISSPSGDPKDSSGDGELDLSGIDDLEIDRYILNESEARVKA
ELWMRENAEYLREQKEKEARIAKEKELGIYKEHKPKKSCKRREPILASTAGEAIEKMLEQ
KKISSKINYSVLRDLNSKGGGSPPRDDSQPPEHTSTKKLSRRKRAATRNSADPGTSMGKR
LRPLVSAQPAKKAAVGEALLLNSPALGAEPVKPSAVLVESGPVSYHPEEDADEEDAEEED
GEPCVSALQMMGGNDYGCDGDEDDGY
Download sequence
Identical sequences D4A8W8
ENSRNOP00000019689 NP_001100231.1.100692 NP_001100231.1.4139 ENSRNOP00000019689 10116.ENSRNOP00000019689

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