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Domain assignment for ENSRNOP00000020780 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000020780
Domain Number 1 Region: 25-141
Classification Level Classification E-value
Superfamily L domain-like 1.39e-21
Family U2A'-like 0.033
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000020780
Domain Number - Region: 496-579
Classification Level Classification E-value
Superfamily PspA lactotransferrin-binding region 0.00222
Family PspA lactotransferrin-binding region 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000020780   Gene: ENSRNOG00000015465   Transcript: ENSRNOT00000020780
Sequence length 646
Comment pep:known chromosome:RGSC3.4:1:30031813:30061217:1 gene:ENSRNOG00000015465 transcript:ENSRNOT00000020780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPGQRLVLCEETVRERSGLGPHRDLAELRSLSIPGTYQEKITHLGNSLMHLTALKSLDL
SRNSLVSLEGIQYLVSLESLNLYYNCISSLAEVFRLHTLMELQDVDFRLNPVVKNESDYR
LFVVHMLPKLRQLDDRPVRESERKASQLHFAPEDSLDSKENFSATLTVGRPHHLRNRCTE
TSAKKCLVMDADDEAVLNLIAECEWDLSNPPGNMSSSQKEHDADLHYAQESRHLLSPLSI
QHQCGDSARRGHEKKKVTSRGCPGHSPQDQLCGELPPQHGLPEACHLHVQHARIASQPDS
VDVEDCASSSQKSTLPSQKIVNPLPVPEKYRKRRMPGGRFQVPSDRECLSFLERADVPSS
LEDSLSRQDGLEGQSQVALSHSEALEAEERTSHGTSDPRVLSPKLCSAAAPERRSTLEMA
LLEALLDLIDRCSSGSGSLHGNEAFLAQARQVLSSLQEFTAARDGSALEKEGVGYLSLEN
KALQSRLTEQHQQYAAAVTKVTTELNNTKRELDTLRQHLDNSLEENDNLKSLLYNVKQEV
KHADTSGALSLQITGLQTSMKQLSGEVMELKQHVAHYDKIQELTQMLQESHSSLVSTNEH
LLQELSRARAQHRAEVEQMHWSFQELKKTTALAPHRSSRLGGRQSC
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Identical sequences D3ZVQ1
XP_001056326.1.4139 XP_217737.4.100692 ENSRNOP00000020780 10116.ENSRNOP00000020780 ENSRNOP00000020780

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