SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000022956 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000022956
Domain Number 1 Region: 165-612
Classification Level Classification E-value
Superfamily Seven-hairpin glycosidases 7.98e-169
Family Class I alpha-1;2-mannosidase, catalytic domain 0.0000000000122
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000022956   Gene: ENSRNOG00000017087   Transcript: ENSRNOT00000022956
Sequence length 625
Comment pep:known chromosome:RGSC3.4:5:153318031:153459786:-1 gene:ENSRNOG00000017087 transcript:ENSRNOT00000022956 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLVRKVPGFVPASSWGLRLPQKFLFLLFLSGLVTLCFGALFLLPHSSRLKRLFSASRTQQ
PGLEVMAEIAGHHSVSEQEPPPNPAPAAPAPGEDDSGRLVGVLRRKGWLRRTRPTGPREE
GNRVSALRPQEESVRFSFDYNSFRSRLRHPVLGTRTDESQESQSLVRAQREKIKEMMRFS
WQSYRRYAMGKNELRPLTKDGFEGSMFGGLSGATIIDSLDTLYLMELKEEFQEAKAWVQD
SFHLNVSGEASLFEVHIRYIGGLLSAFYLTGEEVFRVKAIKLGEKLLPAFNTPTGIPKGV
VNFKSGSWGWATAGSSSILAEFGSLHLEFLHLTELSGNPIFAEKVRNIRKVFREIDKPFG
LYPNFLSPVSGNWVQHHVSVGGLGDSFYEYLIKSWLMSAKTDMEAKTMYYEALEAIETYL
VNVSPGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEDAKEDKRAYYRELAAQITRTC
HESYARSDTKLGPEAFWFNSGREAVATQLSESYYILRPEVVESYMYLWRQTHDPIYREWG
WEVVMALEKHCRTEGGFSGIQDVYSSNPNHDNRQQSFFLAETLKYLYLLFSEDDVLSLED
WVFNTEAHPLPVNRSDSSSVAGHRH
Download sequence
Identical sequences ENSRNOP00000022956 10116.ENSRNOP00000022956

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]