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Domain assignment for ENSRNOP00000036443 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000036443
Domain Number 1 Region: 259-494
Classification Level Classification E-value
Superfamily vWA-like 2.49e-33
Family Integrin A (or I) domain 0.0078
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000036443
Domain Number - Region: 131-161
Classification Level Classification E-value
Superfamily Prokaryotic SH3-related domain 0.0439
Family GW domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000036443   Gene: ENSRNOG00000001066   Transcript: ENSRNOT00000038817
Sequence length 948
Comment pep:known chromosome:RGSC3.4:17:79690027:79726712:1 gene:ENSRNOG00000001066 transcript:ENSRNOT00000038817 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQQLVHLLVWLFLLEARAFEIPINGYSEFAEYDDLVELAPDKLPFVQENRRHQRSLSEDS
GEEMDSVDPVTLYSYKVQSTITSRMATTTIQSKLVNHSPLPQNVVFDVQIPKGAFISNFT
MTVNGMTFTSSIKEKTVGRALYSQARAKGKTAGWVRSRTLDMENXHTEVNIPPGAKVQFE
LHYQEVKWRKLGSYEHKIHLQPGKLAKHLEVNVWIIEPQGMRFLHVPDTFEGHFQGVPVI
SKGQQKAHVSFKPTVAQQRKCPNCTETAVDGELVVVYDVNREEKAGELEVFNGYFVHFFA
PENLDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTEDQFSVVDFNHNVRSWRN
DLVSATKTQIADAKRYIEKIQPSGGTNINEALLRAIFILNEASNMGLLNPDSVSLIILVS
DGDPTLSELKLSKIQKNVKQNIQDNISLFSLGIGFDVDYDFLKRLSNENRGIAQRIYGNR
DTSSQLKKFYNQVSTPLLRNVQFNYPQASVTDVTQNSFHNYFGGSEIVVAGKFDPSKLSE
VQSVITATSANTELVLETLSQMDDLEEFLSKDKHADPEFTKKLWAYLTVNQLLTERSLAP
TAASKRKITKAILQMSLDHHIVTPLTAMVIENDAGDERMLADSPPQDHSCCSGALYYGTK
VASGPIPSWANPSPTPATAMLAVGAKPLESTPPPHVIRVENDPHFIIYLPKSKKNICFNI
DSEPGKILSLVSDPESGLSVNGQLIGAKKTENGKLSTYFGKLGFYFQKEDMKIEISTEAI
TLSSGSSTSRLSWSDTARLGNERQVLVQGSTPYALCYPWDRELFSKLTVYHTISRRHRED
LDFLLLASPLSKTHPQTERSVPQIHRVAGLARGAERVGRNSKKGTQNWSKGRFQLCLVTV
GMQKDYRTNIVFGTDVPCWFVHNSGKGFIDGHYKDYFVPQLYGFLKRP
Download sequence
Identical sequences ENSRNOP00000036443 10116.ENSRNOP00000036443

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