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Domain assignment for ENSRNOP00000053214 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000053214
Domain Number 1 Region: 131-225
Classification Level Classification E-value
Superfamily PDZ domain-like 2.1e-21
Family PDZ domain 0.0000796
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000053214
Domain Number - Region: 19-54
Classification Level Classification E-value
Superfamily PDZ domain-like 0.00333
Family PDZ domain 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000053214   Gene: ENSRNOG00000037282   Transcript: ENSRNOT00000056376
Sequence length 772
Comment pep:known chromosome:RGSC3.4:X:159716489:159746210:-1 gene:ENSRNOG00000037282 transcript:ENSRNOT00000056376 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGCNMCVVQKPEEQYKVMLQVNGKELSKLSQEQTLEALRASKEPLVIQVLRRSPRLRGDS
SCHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMGILEPYVLSELPPISHEYYDPAEFME
GGPQEAERMDELEYEEVELCKNSHQDKLGLMVCYRTDDEEDLGIYVGEVNPNSIAAKDGR
IREGDRIIQINGMDVQNREEAVAILSQEENTNISLLVARPESQLAKRWKDSDRDDFLDDF
GSENEGDLRTRKLKSPPVQQTGNDEKGAPDGGPGLSNSQDLDSGVGRTDESTRNEESSEH
DLLGDEPPSTTNTPGSLRKFGLQGDALQSRDFHFSMDSLLAEGAGLGGADLPGLTDEEYE
RYRELLEIKCHLENGNQLGILFSRASSGNSALDVNRNESLGHEMAMLEEELRHLEFKCRN
ILRAQKMQQLRERCMKAWLLEEESLYDLAASEPKKHELSDISELPEKSDKDSTSAYNTGE
SCRSTPLLVEPLPESPLKRSAAGNSNLNRTPSGPPVTTHLKAAPSPGSPAKFRSLSRDPE
VGRRQHTEERVRRSTKTSVTLERVGPEGSPYLSRRHRGQEIEQYHSCVQLAPPRTLEDLS
HGSLSLASGSRVGGVVAAAVEAPRMEWKVKVRSDGTRYVAKRPVRDRLLKARALKIREER
SGMTTDDDAVSEMKMGRYWSKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPE
LNIIALSHRKTMKKRNKKILDNWITIQEMLAHGARSADGKRIYNPLLSVTTV
Download sequence
Identical sequences 10116.ENSRNOP00000053214 XP_006229624.1.100692 ENSRNOP00000053214

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