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Domain assignment for ENSRNOP00000059245 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000059245
Domain Number 1 Region: 323-395
Classification Level Classification E-value
Superfamily TB module/8-cys domain 9.16e-20
Family TB module/8-cys domain 0.0005
Further Details:      
 
Domain Number 2 Region: 38-109
Classification Level Classification E-value
Superfamily TB module/8-cys domain 3.27e-19
Family TB module/8-cys domain 0.0000985
Further Details:      
 
Domain Number 3 Region: 116-250
Classification Level Classification E-value
Superfamily Growth factor receptor domain 3.45e-18
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 4 Region: 438-566
Classification Level Classification E-value
Superfamily Growth factor receptor domain 1.88e-17
Family Growth factor receptor domain 0.0092
Further Details:      
 
Domain Number 5 Region: 563-679
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000188
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 6 Region: 394-443
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000000948
Family EGF-type module 0.0047
Further Details:      
 
Domain Number 7 Region: 208-331
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000154
Family Growth factor receptor domain 0.0086
Further Details:      
 
Domain Number 8 Region: 1-52
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000691
Family EGF-type module 0.0066
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000059245
Domain Number - Region: 773-820
Classification Level Classification E-value
Superfamily Cadherin-like 0.000247
Family Cadherin 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000059245   Gene: ENSRNOG00000043219   Transcript: ENSRNOT00000066548
Sequence length 859
Comment pep:known chromosome:RGSC3.4:18:53883011:53913997:-1 gene:ENSRNOG00000043219 transcript:ENSRNOT00000066548 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DINECDEDPNICLFGSCTNTPGGFQCICPPGFVLSDNGRRCFDTRQSFCFTNFENGKCSV
PKAFNTTKAKCCCSKMPGEGWGDPCELCPKDDEVAFQDLCPYGHGTVPSLHDTREDVNEC
LESPGICSNGQCINTDGSFRCECPMGYNLDYSGVRCVDTDECSIGNPCGNGTCANVIGSF
ECNCNEGFEPGPMMNCEDINECAQNPLLCAFRCMNTFGSYECTCPVGYALREDQKMCKDL
DECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENECRTKPGICENGRCV
NIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSSRNLVTKSECCCDGG
RGWGHQCELCPLPGTAQYKKICPHGPGYATDGRDIDECKVMPSLCTNGQCVNTMGSFRCF
CKVGYTTDISGTACVDLDECSQSPKPCNFICKNTEGSYQCSCPRGYVLQEDGKTCKDLDE
CQTKQHNCQFLCVNTLGGFTCKCPPGFTQHHTACIDNNECGSQPSLCGAKGICQNTPGSF
SCECQRGFSLDASGLNCEDVDECDGNHRCQHGCQNILGGYRCGCPQGYVQHYQWNQCVDE
NECSNPGACGSASCYNTLGSYKCACPSGFSFDQFSSACHDVNECSSSKNPCSYGCSNTEG
GYLCGCPPGYFRVGQGHCVSGMGFNKGQYLSVDSEAEDDENALSPEACYECKINGYAKKD
GRRKRSAPEPEPASAEEQISLESVAMDSPVNMKFNLSGLGSKEHILELVPAIEPLNNHIR
YVISQGNDDGVFRIHQRNGLSYLHTAKKKLTPGTYTLEITSVPLYGKKELRKLEERNEDS
YLLGVLGEALRMRLQIQLY
Download sequence
Identical sequences 10116.ENSRNOP00000059245 ENSRNOP00000059245

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