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Domain assignment for ENSRNOP00000061145 from Rattus norvegicus 69_3.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000061145
Domain Number 1 Region: 922-1081
Classification Level Classification E-value
Superfamily vWA-like 5.56e-21
Family Integrin A (or I) domain 0.013
Further Details:      
 
Domain Number 2 Region: 480-623
Classification Level Classification E-value
Superfamily vWA-like 0.00000000000697
Family Ku80 subunit N-terminal domain 0.044
Further Details:      
 
Domain Number 3 Region: 142-298
Classification Level Classification E-value
Superfamily vWA-like 0.00000223
Family Trunk domain of Sec23/24 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000061145   Gene: ENSRNOG00000025110   Transcript: ENSRNOT00000065543
Sequence length 1147
Comment pep:known chromosome:RGSC3.4:1:179585656:179634494:1 gene:ENSRNOG00000025110 transcript:ENSRNOT00000065543 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EKCQGSMDRNTDRDPQKQLNQKTMNDVTQNSQDGLLVTHVNQTQDLLRLQRSETQTSALE
DSEDWLAMHSLKFEKLTLADLISQGTVELEDQNNAVPKVHFTTQTIYHFTSRLSDTIELY
QQRMRWLTENSKKAFGLIKGSRVGLLIDSSQVSSGPQTEEFQNDLTSLIDEQLSLKEKLY
VLTFGGTTNFLWPDPVEVSASTLQELKLWVKTLQPEGSSNLLQALKKVLARKELNSLVAI
LRSCPDQPSEFLSDFIQQSTLGRSLFIHIVTYKCDDHVPSAILKNLTDALGGHYHCYSPE
SELYTSRDVDELLAETHKAQGLFSQLQALCHNNPCEELSCMIEEISTEIAKGPFTSLLPK
PPKHEAPLTIKFPDLDKTSAEWLKINGLKAKKLGLYQVLAPNAFNPVEEFVPILQKTVGA
TIHEKAMVQFEWHDGTVKNIHVDPPVLFEYQKQLGKAVQIYEKRLQWLSLTSRRFWGTVC
QRRVVILLDVSVTNSMFIIHIQHSLRLLLEEQLSNKDYFNIIAFGSTVESWRPEMVAVSH
DNLQRAWRWALGLQCQGSRNVLGALRKAIEVDFKDKTKHESQGIYLFTGGVPDQDVHILS
AYVAEACGGCDLQLNVCLFYVGEPQMNTTPPACYASRTDTAAAYKEVTQAACGRFHWFGE
TGIYESDDSNAIVSEIEKALNYSQKCAFLVASLKNHSGKELLTAALQKDKPRTLQQSQPK
KLYPPKPTAPSVARMSIKDDVDGETSSQLKALRCHPLNAATQPGKEGTVEQRTKANPRTK
AKLFLFYTESGNSVGSVYKRYSQGKPIRRINSSIELPRKDTLCSSQEWTATCGLKRLKLE
LSKCLGPNCRYQKSVRGSALARHCSLFPSIEINGVVRHIQWTLREMETYITGLEKVMRCY
VQRLHWLLSGSRRLFGTILESNVCILLDTSGSMGPHLQWMKTELVLLIWEQLRKHCDRFN
LLSFARDPQPWQNTLVESTDAACHEAMQWVAHLQAQGSTSVLTALMKAFSFQDVQGLYLL
TDGKPDTSCSLILDTVQRFQKERGVKVHTISLTSTDRAAIEFLRKLASLSGGRYHCPVSD
EALSRIQGLLARGFIEERDPKLPLFEGDDLKILTQEFTKARNLLKQAQVFRSQLLKKNGM
QSKVTAC
Download sequence
Identical sequences ENSRNOP00000061145 10116.ENSRNOP00000032210

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