SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMMUP00000012039 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMMUP00000012039
Domain Number 1 Region: 195-231
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 2 Region: 157-193
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000929
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 3 Region: 116-156
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000011
Family LDL receptor-like module 0.00086
Further Details:      
 
Domain Number 4 Region: 74-126
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000203
Family EGF-type module 0.012
Further Details:      
 
Weak hits

Sequence:  ENSMMUP00000012039
Domain Number - Region: 8-64
Classification Level Classification E-value
Superfamily YWTD domain 0.00085
Family YWTD domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000012039   Gene: ENSMMUG00000009185   Transcript: ENSMMUT00000012842
Sequence length 435
Comment pep:novel scaffold:MMUL_1:1099548049618:28868:53965:-1 gene:ENSMMUG00000009185 transcript:ENSMMUT00000012842 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LAGANRLTLEDANIVQPLGLTVLGKHLYWIDRQQQMIERVEKTTGDKRTRVQGRVAHLTG
IHAVEEVSLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCS
PDQFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDGE
ADCQDRSDEADCDAICLPNQFRCASGQCVLIKQQCDSFPDCIDGSDELMCEITKPPSDDS
PAHSSAIGPVIGIILSLFVMGGVYFVCQRVVCQRYAGANGPFPHEYVSGTPHVPLNFIAP
GGSQHGPFTGIACGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTKATLYPPILNP
PPSPATDPSLYNMDMFYSSNIPATARPYRPYIIRGMAPPTTPCSTDVCDSDYSASRWKAS
KYYLDLNSDSDPYPP
Download sequence
Identical sequences ENSMMUP00000012039 9544.ENSMMUP00000012039 ENSMMUP00000012039

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