SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSMMUP00000013945 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMMUP00000013945
Domain Number 1 Region: 26-205
Classification Level Classification E-value
Superfamily MHC antigen-recognition domain 3.36e-85
Family MHC antigen-recognition domain 0.000000033
Further Details:      
 
Domain Number 2 Region: 208-298
Classification Level Classification E-value
Superfamily Immunoglobulin 8.12e-30
Family C1 set domains (antibody constant domain-like) 0.0000246
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000013945   Gene: ENSMMUG00000010641   Transcript: ENSMMUT00000014886
Sequence length 299
Comment pep:known scaffold:MMUL_1:1099214738742:15723:19029:-1 gene:ENSMMUG00000010641 transcript:ENSMMUT00000014886 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVMAPRTLLLVLSGVLALTQTQAGSHSMRYFYTAVSRPGRREPLFIAVGYVDDTQFVRF
DSDAESPRMEPRAPWVEQEGPEYWDRETQNMKTATQTYRGNLRTLLRYYNQSEGGSHTIQ
KMYGCDLGPDGRLLRGYEQFAYDGRDYIILNEDLRSWTAADMAAQFTQRKWEAARAAEQH
RTYLEGECLEWLRRYLENGKETLQRADPPKTHVTHHPVSDYEATLRCWALGFYPAEITLT
WQRDGEEQTEDTELVETRPTGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRFE
Download sequence
Identical sequences ENSMMUP00000013945

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]