SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMMUP00000028875 from Macaca mulatta 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMMUP00000028875
Domain Number 1 Region: 184-336
Classification Level Classification E-value
Superfamily Cap-Gly domain 1.44e-43
Family Cap-Gly domain 0.0000000578
Further Details:      
 
Domain Number 2 Region: 36-160
Classification Level Classification E-value
Superfamily Cap-Gly domain 9.82e-36
Family Cap-Gly domain 0.00000215
Further Details:      
 
Weak hits

Sequence:  ENSMMUP00000028875
Domain Number - Region: 741-980
Classification Level Classification E-value
Superfamily Tropomyosin 0.000183
Family Tropomyosin 0.00047
Further Details:      
 
Domain Number - Region: 1353-1387
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00767
Family Retrovirus zinc finger-like domains 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000028875   Gene: ENSMMUG00000021928   Transcript: ENSMMUT00000030852
Sequence length 1392
Comment pep:known_by_projection chromosome:MMUL_1:11:123519237:123622584:-1 gene:ENSMMUG00000021928 transcript:ENSMMUT00000030852 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTISSEKASSTPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLTRKVQAEDEANGLQMTPASRATSPLSTSTASMVSSSPATPSNIPQKPSQPAAKEPS
ATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKANAVRRVM
ATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTETSSRYARKISGTTALQEALKEK
QQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA
DREKVELLNQLEEEKRKVEDLQFRVEKKSITKGDLEVATVSEKSRIMELEKDLALRVQEV
AELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQK
EIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFS
KGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEK
ENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQL
KATEEKLLDLDALRKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ
GRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE
QFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTK
MNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELER
KLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENS
GLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTL
KENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL
GRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKD
AELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSG
NTDTQADEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNNYDSDD
QEKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRGEERPYCEICEMFG
HWATNCNDDETF
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Identical sequences ENSMMUP00000028875

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