SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|344996410|ref|YP_004798753.1| from Caldicellulosiruptor lactoaceticus 6A

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|344996410|ref|YP_004798753.1|
Domain Number 1 Region: 83-176
Classification Level Classification E-value
Superfamily Ribosomal protein L6 8.06e-35
Family Ribosomal protein L6 0.0000222
Further Details:      
 
Domain Number 2 Region: 1-82
Classification Level Classification E-value
Superfamily Ribosomal protein L6 5.14e-30
Family Ribosomal protein L6 0.0000564
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|344996410|ref|YP_004798753.1|
Sequence length 182
Comment 50S ribosomal protein L6 [Caldicellulosiruptor lactoaceticus 6A]
Sequence
MSRIGRKPIDIPSGVDVKIDGNVITVKGPKGTLTREIHPEMIVKIENNQIIVQRPSDERF
HKALHGLTRTLIANMVEGVTKGYEKVLEVVGIGYRAQKQGKKLILNVGYSHPVEIEEPAG
ITIEVPDQNRIIVKGIDKQQVGNFAANIRKVREPDPYLGKGIKYADEVLRLKEGKAGKGG
KK
Download sequence
Identical sequences E4SAR3 G2PWK8
gi|312793924|ref|YP_004026847.1| gi|344996410|ref|YP_004798753.1| WP_013432986.1.61561 WP_013432986.1.70627 WP_013432986.1.78124

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]