SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|383762561|ref|YP_005441543.1| from Caldilinea aerophila DSM 14535 = NBRC 104270

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|383762561|ref|YP_005441543.1|
Domain Number 1 Region: 79-213
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 1.78e-23
Family GntR ligand-binding domain-like 0.027
Further Details:      
 
Domain Number 2 Region: 9-75
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.34e-19
Family GntR-like transcriptional regulators 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|383762561|ref|YP_005441543.1|
Sequence length 228
Comment GntR family transcriptional regulator [Caldilinea aerophila DSM 14535 = NBRC 104270]
Sequence
MVRPTFRSKPKVVYDMLREAIIRGEYKPGDRLVIDEVAAQLGVSPIPVREAVRQLEADGL
IVFEPYSGATVTQLSPKLIFEIFALLEALEVICGRRACACMTEAELAELEALVQAMDDAL
KDPDTWSQLNRQFHLTICRFAQVQLIERMLEMVLDHWERLRLHYVSAVLQPRIPEAQQDH
REMIAAFRRRDPEEVESLLRSHNQRALAAYIDLLTQSGHLEQQTGGCV
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Identical sequences I0I308
gi|383762561|ref|YP_005441543.1|

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