SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 001890199|e5ck0A1|109.4.1.710|A:24-626 from SCOP2 SCOPe CATH ECOD

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  001890199|e5ck0A1|109.4.1.710|A:24-626
Domain Number 1 Region: 3-195,225-254,284-603
Classification Level Classification E-value
Superfamily TPR-like 9.3e-95
Family SusD-like 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 001890199|e5ck0A1|109.4.1.710|A:24-626
Sequence length 603
Sequence
AMSSPTRALGFLYSCYGGVSTDLPSAYLGEINSTTDEYVLPYSWNTDGYWGAYAFNTASS
TNQDWLWGTTYQYIGQCYLFLQKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYG
PIPITDSYIPMDTPTSEYNGRFHFDYCVDWIANQLDEAAKVLPANRTATNEWGRATSTIA
KAVKARLLLYAASPLWNGSFPYPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEAL
TLATTSGDRELYDDDEYYSRQSLNLPFVPGVADVEDNKEFLKNVMKMRYAVSTRESEGNK
EIIWGLSNQFDFYSRYPLRILKKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFT
PSSEWFESAGISSREDIIKLNVGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHG
YNPSLFNRDHSVTGFLTQKFVDPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAAL
GNTQEAIDALNPVRERAGIPKLTLADITNNMTIKDWVHNERFVELWNEGHRFFDVRRWAE
GAKYFGANKREGLNAEVQSPTFEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQA
PGY
Download sequence
Identical sequences 001890198|e5cjzA1|109.4.1.710|A:24-626 001890199|e5ck0A1|109.4.1.710|A:24-626

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]