SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 10141.ENSCPOP00000010779 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  10141.ENSCPOP00000010779
Domain Number 1 Region: 392-440,497-696
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 7.41e-76
Family Lesion bypass DNA polymerase (Y-family), catalytic domain 0.0000956
Further Details:      
 
Domain Number 2 Region: 20-130
Classification Level Classification E-value
Superfamily BRCT domain 3.79e-22
Family DNA ligase 0.075
Further Details:      
 
Domain Number 3 Region: 701-815
Classification Level Classification E-value
Superfamily Lesion bypass DNA polymerase (Y-family), little finger domain 0.00000000000000412
Family Lesion bypass DNA polymerase (Y-family), little finger domain 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 10141.ENSCPOP00000010779
Sequence length 1228
Comment (Cavia porcellus)
Sequence
MRRGGWRKRAENDWEKWGGYMAAKVQKLEQQFRSDAALQKDGTSSTIFSGVAIYVNGYTD
PSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPTAKIKELKGEKVIRPEWIVESIKAG
RLLSYIPYQLYTKQSNAQRSLNFNPVCKPEDPVPGPSHVAKQPNNKVNHVIKKIEAENEV
KVNGMNSWNEQDANSDFSFVDLEHMLPGRKQNGIPHPRSSSALFNGHTPCSNGALKTQDC
LVPEGNSVASRLSPDSAQDEEKVEKSSTDFRDCALQQLQQSSGNADTLQNPHRTNSLSPS
LHSSAKINGAHHSTVQGPSSTKSTSLLPAFSKAAPSVPFKPSDSSFISDFYSHSRLHHIS
TWKCELTEFVNTLQRHSSGVFPGREKTGRSALVVTDTGNMSVLSSPRHQSCIMHVDMDCF
FVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKLVKGKAADTLDSSV
WENQDSTQTNGIDSVLSKAEIASCSYEARQVGIKNGMFFGHAKQLCPSLQAVPYDFHAYK
EVARTMYETLASYTHSIEAVSCDEALVDITEILAETKLTPDEFANAVRMEIKDRTKCAAS
VGIGSNILLAKMATKKAKPDGQYHLKPEEVDDFIRGQLVANLPGVGRSMEYKLTSLGIKT
CGDLQHMTMAKLQKEFGPKIGQTLYRFCRGLDDRPVRTEKERKSISAEINYGIRFTQPKE
AEAFLLNFSEEIQRRLEAAGMKGKRLTLKIMVRKPGAPIETAKFGGHGICDNIARTVTLD
QATDSAKIIGKAILNMFHTMKLNISDMRGVGIHVNQLVPTNPNPSACSSRASAQPGHFPG
GSHSVRDLLQVHKAKRPTEEESKEGFLAAVDMDTSSAPRTCTLLPPCSPHLPATVSADTV
KGSSSRKWNGLHCPVTAQSRLNLSIEIPSPSQLDQSVLEALPCDLREQIEQACALQQGES
RGDRKKEPVNGCNTGILPQVVGTVLLQIPEPQESNSDTGINIIALPAFSQVDPEVFAALP
AELQKELKAAYDQRQRQGEDTTHQPPASVSVPKNPSLQLKPVAIQSPLKNKLNSPAKTLP
GACMSPQKLMDGFLKPGGPAAEKLQEELSASTSGVPGQSTLQPDQPSCARPAAPNLAGAI
EFNDVKTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSVES
VWNMAFDFILDNVQVVLQQTYGSTLKVT
Download sequence
Identical sequences ENSCPOP00000010779 ENSCPOP00000010779 10141.ENSCPOP00000010779

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]