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Domain assignment for 10141.ENSCPOP00000015186 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  10141.ENSCPOP00000015186
Domain Number 1 Region: 185-338
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 2.04e-25
Family Retrovirus capsid protein, N-terminal core domain 0.0082
Further Details:      
 
Domain Number 2 Region: 343-423
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.03e-21
Family Retrovirus capsid protein C-terminal domain 0.001
Further Details:      
 
Domain Number 3 Region: 1-88
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 3.41e-18
Family Mason-Pfizer monkey virus matrix protein 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 10141.ENSCPOP00000015186
Sequence length 426
Comment (Cavia porcellus)
Sequence
MGQSASSPFLKILKHLLSIYGISLRSADLDMCIDTIKEYNPWFPDEGTLDVEVWRKARVS
IERAMQQEEKIPLRFWAIWSVVYSLLKAMEDEHIVENLQLEIKPVIQELPLTEEEQNVVQ
NDAIALSSEKASKLKAIQHLTQEVKQLSVKQNPPIVPSAPPPSNPNWSKAKLALADLPKL
GDSDEEKPAFAFPVIRPQPIDGEAVPPRWEAFNMDDLAKLKKAVTLYGPQAHYTRELITS
VTDHYGNLAPYDWKALAKILLKEPEYLQWHMWFMEGCAEKARQNADDRDPNIRLLSYPML
SGTGFFDTVEHQAGAPREIHAQLKDIALKAWDKIRPKGSEYGSWAKVLQGANEPYVEFVA
RLQNVIEKTVVGQDLQEHLLKMLAFENANDECKRALIPIKDTGTIDNFIKQCKDLNSESR
KMQLFA
Download sequence
Identical sequences ENSCPOP00000015186 10141.ENSCPOP00000015186 ENSCPOP00000015186

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