SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI104890 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI104890
Domain Number 1 Region: 289-320
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000445
Family Retrovirus zinc finger-like domains 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI104890
Sequence length 362
Comment (Postia placenta MAD 698)
Sequence
MQSPINEQPLELPEVQYVPIEIPDIELPPAPPASTNAPVEVPMATFTQADIDQRIAVALA
AYQSQQSTANRPLRLDIPAPEPFSGKAEDLRCFIQCVLSYFVTTNNTRLSDEAKIAFTVA
LMRKDLGKTWADTYYEKSAGGVQVYSTWANFVAALEEVFPEHRMKTVLSLGNYVTRFEQL
ASKAQLKDTKVNGTNRIENDYHTLHTNFVKGLPKELYFALATRVARDPPNTMKAWYNEVR
NTDAVKQGALVVTDTRDYGEPMDIDAAAIASTFASTSGGRKWELGAVLNEANRKLHRDGN
LCFYCHIKGHSAKDCHKKAAARQGGGRPNQGGSGKDDFRARIKALSADEKQELYEELTME
DF
Download sequence
Identical sequences B8PK73
jgi|Pospl1|104890|fgenesh3_pg.188__11 XP_002476081.1.31404 104341.JGI104890

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]