SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 104341.JGI126683 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI126683
Domain Number 1 Region: 40-173
Classification Level Classification E-value
Superfamily Metallo-dependent phosphatases 0.000000645
Family YfcE-like 0.049
Further Details:      
 
Domain Number 2 Region: 589-681
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000188
Family Canonical RBD 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI126683
Sequence length 715
Comment (Postia placenta MAD 698)
Sequence
MQSVSRPASTSTRPTASPNPRPTQHQVNTKTQVFDTTHGRLLCIADIRGRVTTLNDLARE
ANASAIIHTGDFGFFEASSLDRINDRTLRHLTMYSPLIPAAQRNHLLASENPPSIIRSTV
GISMLSEFPLLLSGQMKLDVPVYTVWGACEDVAVLEKFRTGQYEVNNLHILDEATTRCLD
IGGIKLRLLGLGGALVPHKMFDNGDGHATIAGGQGTMWTTALQIGELVDTAQRVFDQTET
RLLVTHASPGREGIINQLGLVLRADLTVSAGLHFRYASSYNEFSVQGDFEGLRHKMQIGK
EGFDKVWESVKVQVNAVIDEHQRVLLDKALSVVERIPAPTNQPGPNGQFPQEEPAWKNCW
NWNLCDAAYGSLVLDIKDGRVSAELKSQGFNYAYRRTATPTTAEPNSANSTSPTANAGSG
ASATPTLSTKGPGTPLLADKSGPPYLTTSKSKPTTPPPGLTDSGRETPGDKPNGATPNSA
GAADRADKERAKRERKKERKQLERVEREAGAVKEKEGGSKPATPTLTEGPSSPTPQQQVK
SGKATPDLRATEDGVMSPVADSSAGARTPTSKRPPRNPWTIFMRSREPANEQEVRDFFGD
AKAGIIRINYPQNFPGRAQKMMYVEFGDEDAMKAGLAKQGEKLKDVIPELKQATDKESRA
AENGGPPRGFGGRGRGGRGGYAARGFAAAGLTRGVPRENGDAPASSEGPKASEGS
Download sequence
Identical sequences A0A1X6MWI8
jgi|Pospl1|126683|estExt_fgenesh3_pg.C_180038 104341.JGI126683

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]