SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI27669 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI27669
Domain Number - Region: 184-202
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0108
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI27669
Sequence length 202
Comment (Postia placenta MAD 698)
Sequence
VALSLLDGDARAWATPIFSQLASVQIGIQGATTPFVDEAAFLKAFKARFGNLDDAAAAQV
ELAKLCADKTMREKRTAAEFSALFKGLADRSGYGNLELRDKYLSGIPSRVYRKLELETFA
TWQAADKRATEVKQILDISRAHRPELKNFFSARGRGRGGARGGAPQSHAALASINAAIGK
GNFPGSCFGCGKQGYRRFECPN
Download sequence
Identical sequences B8PP34
104341.JGI27669 jgi|Pospl1|27669|gw1.579.1.1 XP_002477439.1.31404

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]