SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI47376 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI47376
Domain Number - Region: 238-260
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00119
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI47376
Sequence length 323
Comment (Postia placenta MAD 698)
Sequence
MSSPAAVPDKETLKLLLPLRYDGKTVIECNRFLSQLHIYWLVNTSLTTIELKVQVALSLL
DGDARAWATPYFAQLASVQVGVQGATTPFANEAAFAAAFRARFGNLDDEAAAQVELAKLC
ADKSVREKRTAAEFSALFKGPADRSGYGDLELRDKYLSGIPSRVYRKIELETFATWQAAE
KRATEVEQILDISRARRPELNNFFSARGRGRGGARGGAPSTHAASASINAAVGKGDFPGT
CFGCGKQGYRRFECPNCKDKPYTKRADARATVASGSTQAATSTPVASPSASISAASAKSE
QSELADLMAQVKSMREELEHYRA
Download sequence
Identical sequences jgi|Pospl1|47376|e_gw1.3.78.1 104341.JGI47376

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]