SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI47452 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI47452
Domain Number - Region: 238-268
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0016
Family Retrovirus zinc finger-like domains 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI47452
Sequence length 329
Comment (Postia placenta MAD 698)
Sequence
MSSPSTAPDKETLKLLLPLRYDGKTVIECDRFLSQLRIYWLINTSLTTIELKVQVALSLL
DGDARTWATPYFAQLASVQMGVQGVTTPFRNEAAFTAAFKARFGNLDDAAAAQVELAKLC
ADKSVREKRTTAEFSTLFKGPADRSGYGDLELRDKYLSGIPSRIYRKIELETFTTWRAAE
KQATEVEQILDISRACRPELNNFFSARGRGRGGARGGAPQLHAASASINAAVGKGDFPGT
CFGCGKQGYRRFECPNCKDKPYTKCADTRATVASGSTQAVTSAPVASSSASISTASAKSE
SSELADLIAQVKSMHEELEHYWAMKEESF
Download sequence
Identical sequences jgi|Pospl1|47452|e_gw1.3.79.1 104341.JGI47452

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]