SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI55092 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI55092
Domain Number - Region: 236-260
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000963
Family Retrovirus zinc finger-like domains 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI55092
Sequence length 329
Comment (Postia placenta MAD 698)
Sequence
MSSPATAPDKETLKLLLPFRYDGKTVIECDRFLLQLRIYWLINTSLTTIELKVQVALSLL
DGDARAWATPYFAQLVSVQMGVQGVTTPFQNEAAFTAAFKARFGNLDDEAAAQVELAKLC
ADKSVREKHTAVEFSALFKGPADRSGYGDLELRDKYLSGIPSRVYRKIEFETFTMWQEAK
KRATEVEQILDISQARRPELNNFFSARDRGRGGARGGAPQSHAASASINAAVGKGNFPGS
CFGCGKQGYRQFECPNCKDKPYTKRANARATVASGSTQVATSAPVASSSASTSTASAKSE
SSELVDLIAQMKSMREELEHYRAMKEEGF
Download sequence
Identical sequences 104341.JGI55092 jgi|Pospl1|55092|e_gw1.123.19.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]