SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI59400 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI59400
Domain Number - Region: 238-260
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00115
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI59400
Sequence length 288
Comment (Postia placenta MAD 698)
Sequence
MSSPAAAPDKETLKLLLPLRYDGKTVIECDRFLSQLRIYWLINTSLTTIELKVQVALSLL
DGDARAWATPYFAQLASVQMGVQGATTPFRNEAAFTAAFKARFGNLDDAAAAQVELAKLC
ADKSVREKRTAAEFSALFKGPADRSGYGDLELRDKYLSGIPSRVYRKIELETFTTWRAAE
KRATEVEQILDISRARRPELNSFFSARGRGRGGARGGAPSSHAASASINAAVGKGDFPGT
CFGCGKQGYRRFECPNCKDKPYTKRADARATVASGSTQAATSAPVASS
Download sequence
Identical sequences 104341.JGI59400 jgi|Pospl1|59400|e_gw1.171.38.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]