SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI62196 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI62196
Domain Number - Region: 195-225
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0015
Family Retrovirus zinc finger-like domains 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI62196
Sequence length 288
Comment (Postia placenta MAD 698)
Sequence
MSLTTIELKVQVALSLLDSDTRTWATPFFAQLISVQLGVQGVTTPFANEVAFATTLKARF
GNLDDEAAAQVELAKLCADKSVREKCTATEFSALFKGPADRSGYGDLALCDKYLNSIPSR
IYRKIELETFTMWEDADKHATEVEQILDISRARRPELNNFFSARGGGQGGACGGAPQSHG
ALASINAAVRKGDFPGSCFGCGKQGYRRFECPNCKDKPYTKCADVQATVASGSTQAATST
PVTTSPSASTSATSASPEKSEMLAALMAQVKSMRKELEHYRAMKEESF
Download sequence
Identical sequences 104341.JGI62134 104341.JGI62196 jgi|Pospl1|62134|e_gw1.52.50.1 jgi|Pospl1|62196|e_gw1.52.48.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]