SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI92472 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI92472
Domain Number - Region: 183-227
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000244
Family Retrovirus zinc finger-like domains 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI92472
Sequence length 394
Comment (Postia placenta MAD 698)
Sequence
MSSTLSFLDQFNAPSTEGGKRISIYTPKHTHVGDSTLLTFLLSNPTDVFNKLKAHNPEAT
NATDRAALEAYLSARREYNEAVKAADEAIDHHKRLLRQQDDRVLTELIRLNNLKVAHCFQ
PLLPCSIRARHNKFIPRAIPNAYLPLPAPLPTSAFRRPPIPSPFLQATPRSTTIPADWQP
NPGWTPKGSCRRCRSSRHWVRDCPDVRCAGCGKEAPGHLEQECGTRPMKRHVSAPPEEPV
RRVGVVVDNVFLEEIINEAKERKEKERQTKAVPIPPPRSANPEPPTSPIAGPLRPHPDTP
IVFRKVDPDWTPDTTQWTWDSSWPHQKHLSGEEWMNVGRNAHKEWFDEEEDDGVDWELYG
DAYIMGSMRTSYLVSYHYVSFFTKHDHTETMVRA
Download sequence
Identical sequences B8PET1
XP_002474185.1.31404 104341.JGI92472 jgi|Pospl1|92472|fgenesh3_pg.105__14

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]