SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI96417 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  104341.JGI96417
Domain Number - Region: 131-163
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00136
Family Retrovirus zinc finger-like domains 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI96417
Sequence length 239
Comment (Postia placenta MAD 698)
Sequence
MYYKKLAGGVQKDRKAVLFLSNYVTRFEQLASKAQLKDAEVNGTNHVENNYHTLHANFVK
GLPKELYFALATRVARDRPNIIKAWYDEGTLIVIDTRDYGEPMDIDTAAITSTFASTSGG
RKWEIGAILNKANWKLHRDGNLCFYCHIKGQSAKDCRKKAAAQQGGERPNQGGSRKDDFC
TRIKTLSADKKWELAAGAGLYTGGDEGRLCALAHAQLVHAQHADAVLGAVDSDVSISGM
Download sequence
Identical sequences B8P0M3
XP_002469264.1.31404 104341.JGI96417 jgi|Pospl1|96417|fgenesh3_pg.5__64

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]