SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 104341.JGI96820 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  104341.JGI96820
Domain Number 1 Region: 307-338
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000152
Family Retrovirus zinc finger-like domains 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 104341.JGI96820
Sequence length 408
Comment (Postia placenta MAD 698)
Sequence
MQSTQFLWDYQPSQDHRSSSTTEQIVASSPPQRGLPYTLEAAPGVVLPVQIHRSLPIKNL
LATIRDTHLLTQKTYSPSYGSASNLHKQQKVCSHPSMNNHSNSLKFTPPAPTNALVEVPM
ATFTQADIDQRIAVALAAYQSQHADEKDLGKTWADAYYEKLAGGVQVYSTWANFVAALEE
VFPEHGTRIKAHQILMKLPERQKDRKTVLSLSNYVTRFEQLASKAQLKDAEVNGTNRVEN
DYHTLHANFVKGLPKELYFALATRGALIVTDTRDYGEPMDIDTAAVTSTFTSTSGGRKWE
LGAVLNKADQKLHRDGNLCFYCHIKGHSAKDCRKKAAARQGGGRLNQGGSGKDDFCARIK
ALSADEKRELTGGQGAPGCCLIYMRENPPGTGNGPLVPSLSGPALPWA
Download sequence
Identical sequences B8PP04
XP_002477409.1.31404 104341.JGI96820 jgi|Pospl1|96820|fgenesh3_pg.546__1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]