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Domain assignment for 135651.CBN11698 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  135651.CBN11698
Domain Number 1 Region: 465-890
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.78e-120
Family Reverse transcriptase 0.0000547
Further Details:      
 
Domain Number 2 Region: 327-417
Classification Level Classification E-value
Superfamily Acid proteases 0.00000000000422
Family Retroviral protease (retropepsin) 0.018
Further Details:      
 
Weak hits

Sequence:  135651.CBN11698
Domain Number - Region: 261-303
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0126
Family Retrovirus zinc finger-like domains 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 135651.CBN11698
Sequence length 1047
Comment (Caenorhabditis brenneri)
Sequence
MDKDELTQQVANLVAALQAIAQNGQVSNQAPTTPATDPTNNVNRLLDSLSSRIPKFRYDP
EEDITFENWWSRYQDIVTKDGATLSEDYKTRLLLEKLETKEYALYANRVLPKLPSEISFE
ESIKTLKLLFRSTTSVFRKRQEFLKIEYHGNGLEEYTGKVLRGFTSSEFKKMSDEQICIM
IWIGGLKGETYQDIRLRALQLIESKPAITLLELEGEVKKLIDIKTDAKSLSTANTKVVDV
NAVQKAKKKGENTAKTDKSQKKPPSSPCFRCKGKHWSSDCEWKEAVCNYCKKVGHLEKCC
ITKKREAKQSPKVKSVMVESAHSVGINRIYKDVEINGKAIPMLFDTGADVTLLSPTHWKE
LGAPKLQKASFQIKSANHQPIDILGYFHCNFVLNGNTGSGPAYVADTDTLLGTEWIKADK
ILWNHLQDPQTVNAVAYSNAENLDHFREQLKLEIQREYKTVLQTGLGKCTKGKASLQLKP
DVKPAFRKARPVPYAALPVVSAEIDRLTNTGVITPIEHADWAAPVVAVSKKNGSIRLCAD
FSTGLNDSIKTNNHPLPTADEIFAKLNGGLYFTQIDLADAYLQCEVDEQAKQLLVINTHK
GLFCYNRLPFGIKAAPGIFQQFMDKLINGLDGTSAYLDDLIVTGSTIEEHNSRVHALMQK
IQDFGFRIRMEKCSFLQHEIKYLGFVINKDGRKPDPEKIQHIKNMPKPENVSQLRSFLGL
VQFYGTFINDFFNLRPPLDALTKKDADYKWTPECQKSFEQIKEILQSDLLLTHFDPKLPI
IVSADASQYGIGCVIAHRFPDGTEKAIYHVSKALTKTQQNYSQIEKEGLGLVTAVTKFHR
FLHGRHFTLRTDHKPLLAIFGGKQGVPVYSANRLQRWAITLLNYSFDIEYVNTKDFGQAD
ALSRLISEQGAAKEPEDQVIATIEVDMTGAVTHNLQYLPVSAEMIRAHTAQDVVLQEILK
CQKSGHWPRFEKNTDRWILANRKDEMACIQECLMIGERIVIPATLRNKVLKTLHRAHPGI
VRMKQLARSYVYWPGLDNDIEKLVKWM
Download sequence
Identical sequences 135651.CBN11698

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