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Domain assignment for 15368.BRADI1G43550.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  15368.BRADI1G43550.1
Domain Number 1 Region: 315-481
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.21e-43
Family Retroviral integrase, catalytic domain 0.0041
Further Details:      
 
Domain Number 2 Region: 690-912,940-1124
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.67e-29
Family Reverse transcriptase 0.012
Further Details:      
 
Domain Number 3 Region: 39-75
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000331
Family Retrovirus zinc finger-like domains 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI1G43550.1
Sequence length 1174
Comment (Brachypodium distachyon)
Sequence
MRQRDHDGSGGSNSSGNRRQKKPRGRTADATRGKDAKEEHGSGSATSGATRNDQCRYCGK
MVHWARECGKKKREEAHLVQADDDAPALLMAQVSSVMEEPEMIHGEVYLNEERAKVRLGP
EWEPVEVPWYLDTGASNHMTGDRKMFADLDEGIIGSVKFGDNSVVGILGRGTVMFAMANG
EHRALGDVYYIPRLKTSIISLGQLDENGCPTAIRSGIMTVRDRREQLIAQVPRLPNRLYR
VSLQIVMPVCLSARSGDAGWLWHERLGHQHFGALQKMSSSGMVRGLPHIKHVNQLCDACL
AGKQRRSPFPQVGKFRATERLELVHADLCGPISPPTPGGRRYFLLLIDDVSRYMWLVLLT
AKDESEAGIRRVKAVAELESGCRLRVLRMDNGGEFTSNAFNDYCADAGIKRHHSAPYTPQ
QNGVVERRNQTVVSMARSMLKARNMPNSFWGEAVTTAVYVLNRSYTRAVDGITPYEAWHS
KAPTVEHLRVFGCVAHVRSAKPHLKKLDDRSSRMVFIGYESGSKAYKVYDPMSRRVHVTR
DVVFDEAASWNWAGTDDVARQGELTVEFSTDASPSGGIAAPAPTKGIGMPPTPLSPPRPA
TPSSSASSPEPSTPASPAPMFVSPPASVTPTSADGDPPARRYRLLDDVHADLDHELNLAA
SEEPTTFAEAEPHHGWRAAMLDEIKSIEENGTWQLVDLPAGHRPIGLKWVYKLKKNAAGD
VVKHKARLVAKGYVQRAGVDFDEVFAPVARLDSVCVLMALAVQLKLEVHHLDVKSAFLNG
DLEEEVYVVQPVGFVDEAAPDKVLRLRKALYGLRQAPRAWNAKLDCTLLSLGFQRCPSEH
AIYVRGSGEDQLLLGVYVDDLIVCGASQQGIQNFKQQMQSSFKMSDLGRLTYYLGIEVKQ
TPGRITLCQSGYATKLLEKAGMGNCNPVHVPMEHRLKLSKVSLNPPTDATLYRSIVGSLR
YLVHTRPDIAFAVGYVSRFMEHPTTEHYGAVKHLLRYIAGTKSYGCVFSFSATGNNLTGY
SDSDMAGDVDDRKSTTGVLFMLGGNSITWQSQKQKVVALSSCEAEYIAATTAACQGVWIG
RLLGELLDEKSGVATLYIDNKSAIQLCKNPVFHDRSKHIETRFHFIRECVDDGRISVESI
GTEDQLADILTKSLAKVKFQELRRRIGVMDLASN
Download sequence
Identical sequences I1GZ13
EG:BRADI1G43550.1 15368.BRADI1G43550.1

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