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Domain assignment for 15368.BRADI2G01640.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  15368.BRADI2G01640.1
Domain Number 1 Region: 321-491
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.2e-43
Family Retroviral integrase, catalytic domain 0.0043
Further Details:      
 
Domain Number 2 Region: 671-893,921-1105
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4.89e-30
Family Reverse transcriptase 0.012
Further Details:      
 
Domain Number 3 Region: 39-76
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000000209
Family Retrovirus zinc finger-like domains 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI2G01640.1
Sequence length 1155
Comment (Brachypodium distachyon)
Sequence
MRQRDHDGSGGSNSSGNRRQKKPRGRTADATRGKDAKEEHGSGSATSGATHNDQCRYCGK
MGHWARECRKKKREEAHLVQADDDAPALLMAQVSSVMEEPEMIHGEVYLNEERAKVRLGP
EWEPVEVPWYLDTGASNHMTGDRKMFADLDEGIIGSVKFGDNSVVGILGRGTVMFAMANG
EHRALGDVYYIPRLKTSIISLGQLDENGCPTAIRSGIMTIRDRREQLIAQVPRLPNRLYR
VSLQIVMPVCLSARNGDAGWLWHERLGHQHFGALQKMSSSGMVRGLPHIKHVNQLCDACL
AGKQCRSPFPQVGKFRATERLELVHADLCGPISPPTPGGRRYFLLLIDDVSRYMWLVLLT
AKDESEAGIRRVKAAAELESGCRLRVLCTDNGGEFTSNAFNDYCADAGIKRHHSAPYTPQ
QNGVVERRNQTVVSMARSMLKARNMPNSFWGEAVTTAVYVLNRSYTRAVDGITPYEAWHG
KAPTVEHLRVFGCVAHVRSAKPHLKKLDDQSSRMVFIGYESGSKAYKVYDPVSRRVHVTR
DVGELTVEFSTDTSPSSGIAAPAPTKGIGMPPTPPSPPRPATPSSSASSPEPSTPASPAP
MFMSPPAGVTPTSADGDPPACRYRLLDNVHADLDHELNLAASEEPTTFAEAEPHHGWRAA
MLDEIKSIEENGTWQLVDLPAGHRPIGLKWVYKLKKNAAGDVVKHKARLVAKGYVQRAGV
DFDEVFAPVARLDSVRVLMALAVQLKLEMHHLDVKSAFLNGDLKEEVYVVQPIGFVDKAA
PDKVLRLRKALYGLRQAPRAWNAKLDCTLLSLGFQRCPSEHAIYVRGSGEDQLLLGVYVD
DLIVCGASQQGIQNFKQQMQSSFKMSDLGRLTYYLGIEVKQTPGRITLCQSGYATKLLEK
AGMGNCNPVHVPMEHRLKLSKVSLNPPTDATLYRSIVGSLRYLVHTRPDIAFAVGYVSRF
MEHPTTEHYGAVKHLLRYIAGTRSYGCVFSFSATGNNLTGYSDSDMAGDVDDRKSTTGVL
FMLGGNSITWQSQKQKVVALSSCEAEYIAATTAACQGVWIGRLLGELLDEKSGVATVYID
NKSAIQLCKNPVFHDRSKHIETRFHFIRECVDDGRISVESIGTEDQLADILTKSLAKVKF
QELRRRTGVMDLASN
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Identical sequences I1HBI5
15368.BRADI2G01640.1 EG:BRADI2G01640.1

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