SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 15368.BRADI2G19940.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  15368.BRADI2G19940.1
Domain Number - Region: 721-747
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00293
Family Retrovirus zinc finger-like domains 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI2G19940.1
Sequence length 748
Comment (Brachypodium distachyon)
Sequence
MANHELVLGHGQDAAELALGQNHHDFGQDHHGLVLGHSHDLGLGHPQDHDFVLSHDHGHE
HDHALVLRHHHHHDSQLVLGHDHTGDLALGQGHDEDSLDGEGHHDLGLSENHELALAEPH
PLVDDDNLDHHFTLEQAHELALEPAHDFSQGPLAVAPVVQSRMMVVSTEFQLAVGQEFPD
VMSCRRAIRDTAIACHFEIQTVKSDKTRFTAKCAAEGCPWRIHAAKLPGVPTFSIRTILD
NHSCVGINHLGHQQASVQWVASTVEERLRENPHCKPKEILEEIHKSHGITLSYKQAWRGK
ERIMATVRGSFEEGYRLLPEYCRQIERTNPGSIARIYGNPDDNCFRRLFISFYASIYGFV
NACRPLIGLDKTTLKNKYLGTLFLATAFDGDGALFPLAFGVVDDENDENWIWFLSELHEL
LEKNTENMPRLTILSDRRKGIVDGVDINFPTAFHGYCMRHLSETFRKEFNNSVLVNLLWE
AASVLTATDFETKLLEIEDTSQEAVAWIREIPPRLWATAFFDGPRYGQLTANITESLNSW
ILDASSLPINQMMECLRRQLMTWFNERREASMQWTTILVPTAERRVQEAIERAQNYRVAR
ASEAEFEVISPHEGTNVVDIRNRVCLCRGWQLYGMPCAHGVAALLSCRQNVHRYTESFFT
IAMYRKTYSQTIHPIPDKTHWNETPEDQGEAEQGRLEVIINPPKSLRPPGRPRKKRVRAE
DLGRVKRVVHCSRCNQTGHFRTTCVAPI
Download sequence
Identical sequences I1HHN5
XP_003568114.1.954 EG:BRADI2G19940.1 15368.BRADI2G19940.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]