SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 15368.BRADI2G36030.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  15368.BRADI2G36030.1
Domain Number 1 Region: 425-613,725-748,1042-1148,1233-1355
Classification Level Classification E-value
Superfamily L domain-like 6.8e-24
Family Leucine rich effector protein YopM 0.012
Further Details:      
 
Domain Number 2 Region: 284-407
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.29e-17
Family Nucleotide and nucleoside kinases 0.069
Further Details:      
 
Domain Number 3 Region: 765-850,888-993,1028-1052
Classification Level Classification E-value
Superfamily RNI-like 0.000000745
Family Rna1p (RanGAP1), N-terminal domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI2G36030.1
Sequence length 1381
Comment (Brachypodium distachyon)
Sequence
MDAAVDAALWVVSKALAPARDGLLESWAASSKLGTNVQALKMELLYAQGMLDSAQGRDIR
SRPALRELLNKLRQLAYAADDVLDELDYFRIQDSLDGTNHAADDDGLVRNAWQTARAAAH
KLKLGSRSRDDPASDEEGGARQACLSRVLPCGGHDKRPSPLPPTNQGVQEAGYACMPKVI
ARACNAADTIGKHFPCHSFPSVCGNDVAPTVRESSDMTRGRRFFCGTCPFKENNHAVLPP
KWKFHRVEMSQKMMELVQQLKPLCAKVSTILNLELLGSTQKEKTSRPKTTPGIVEPTLYG
RDGKKKEIIDLILTYDKYCGDGLRVLPIVGPGGIGKTCLIQHIYKELESSFKVLIWICVS
LDFNANRLLEEIKKYIPEVEGEKGSILHSDEHKRAEDVGQGYLDNLVNHGFFKENKNKDG
PCYVIHDLLHELAVKVSSYECLSIRGSNVNSVQIPRTVRHLSIIVDNVDVKDRGTFDNYK
IDLARRLGKNLDVQNLRTLMLFGEYHGSFIKAFRYLFREARAIRTILLSGVSYSVEDILQ
NFSKLIHLRYLRVISNAKVSLPSVLFRLYHLEIIDLEKCYADFGLTWHMSNLIKLHHFLV
SEDQLELHSNIIEAGKLKFLEELRRFEVGKESKGFELRQLRELTELGGSLDVYNLENGQA
NKEAEEQKILHKKYLHELLLEWSNNAAPQEEDILESLVPHQNLQHLCIKGHGGANCPSWL
GRNLSVKNLKSLCLCDVSWNTLPPLGDFNFINDPGEGFKGLVSSENFQTLKKLKLVNIPN
LKRWVKNDNCHFFSCLEAVEITDCPELVELPFSLPSCCQAEKKNLRTLFPELQNLKIVNC
PQLSSLPPIPWSPAPCSIEIENAGSVFQKLVYSKDDESKLSLQIVGKDGLQSILWSGLVF
HNLPDLEVLTIDNCPPLPLIHLEKLKSLKTLNMHKMGSTLLWFEGESHKMESPVPVERMG
ISSCGANGKELTQVLSHFPNLTDLGIERCEKIAGMVLEHQKVATSPSAKKTELAHRTGHQ
PQQTTGEEEVAAAREELLLLPPQLQQLSIWSCPNLVLSTSPGFGGGGGEFQSLCSLRWLS
VYFCPQFFSYSSSASSCSPFPTSLQELILRGTGGTEMLLPLSNLTSLTRLHVKRCGDLRG
EGLWPLVAQGRLTSLHISTTPKFFSGAEPSWPDDEESSSSSSRVESMVIPCFAGVFTRPI
CRLLSSSLTELICWEDKEVERFTAEQEEALQLLTSLRELKFRDCEKLQVLPASLSKLTNL
KKLYIQGCPALRSLPNDGFPSCLETLSICDCPAIKSLPDHGLPSFLQKLEIDTCPAIKSL
PSNLPSSLQEIEISNCPGIKSLHKEGLPSKLRVLDVRFGDNSKELRRQCHKLKGTIPIVK
C
Download sequence
Identical sequences I1HLV8
15368.BRADI2G36030.1 EG:BRADI2G36030.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]