SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 15368.BRADI3G51620.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  15368.BRADI3G51620.1
Domain Number 1 Region: 288-361
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000236
Family RING finger domain, C3HC4 0.059
Further Details:      
 
Domain Number 2 Region: 200-234
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000034
Family Retrovirus zinc finger-like domains 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI3G51620.1
Sequence length 981
Comment (Brachypodium distachyon)
Sequence
MAVYYKFKSARDYDSIPIEGQFISVINLKERIFESKHLGRGTDFDLMISNAQTDEEYADE
SIMIPKNTSVLIRRIPGRPRMPIVTEPEQVIAAENKVEQVMPAGSAFFGDSSMKFPEESE
WDDEFGNSLYVSDSVPSQPASHAVDASAENQIDEDSKIQALIDTSAVDYSQIPDGYGSGR
GYGRGMGGRMMAGRGFGRGLGRLESRAPPPGYICHRCKVPGHFIQHCPTNGDTRYDVRRM
KPPTGIPRSMLMATPDGSYALPSGAGAVLKPNEAAFEREIEGLPTTRSVGDLPPELRCPL
CKEVMKDAVLTSKCCFKSFCDKCIRDYIINKSMCVCGATSILADDLLPNKTLRETISRIL
EAPPTSSTENPGSMVQIQDMESALPIQPRIRSPAVSAASKEEPKAPTPIEESPDAESHSG
VNTNVDAGSSDKKATTIPDVSEGTMNFKNVKKEKTPEVIHVAKESPQKLPAGEQAVKKKK
KKKVRAPGNGEEQWRNYQDFGAENFGGMPLGPTGVFNPYWGGGMPLPMDYMGAPFPGPMP
YMGYPPGPFDPFGGGVLPQDPFMPPGYMMPTVPRDLSELAVNNMGMNMGPPVVRRDEFEP
RKPDGRRREMDLFNERERDREREREHSRDRERERERERQRERDRDLDRDRDREYRREAKE
SSGAVNDSTSMRPKDVCLFPSIYYLAKLCTTISPMVNLWAAAAAVERSAALDNAFTTVDS
DIYRTRKALCCIPLHARVRSSECQLDWAVFLANPGKADVLRFSGSHKQQSLRPRPEADRS
DRAPPPPRSLSPDRRSRRSPYRSSSSGKKRSSSDRYDDQPLPPPPPAAASSRQEAEHAKA
AAAKAKASVFSRISFPGDASTSDAKRSRRSSSDKPLASSSSSSSKRGVAVAEESDSRHRH
HRHHRETAPMAEEENERRRPAAADYDDEEEQSSEEEKHFKRRPSSSRREREHEEPQQHSR
RSRERADGHHYNGGGGGHRRR
Download sequence
Identical sequences 15368.BRADI3G51620.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]