SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 164328.JGI73352 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI73352
Domain Number 1 Region: 330-416,454-474,514-662
Classification Level Classification E-value
Superfamily Ankyrin repeat 6.51e-45
Family Ankyrin repeat 0.00081
Further Details:      
 
Domain Number 2 Region: 2185-2253,2300-2360
Classification Level Classification E-value
Superfamily EF-hand 9.67e-18
Family Calmodulin-like 0.016
Further Details:      
 
Domain Number 3 Region: 747-860
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.07e-16
Family Toll/Interleukin receptor TIR domain 0.0075
Further Details:      
 
Domain Number 4 Region: 958-1060
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.000000000628
Family Toll/Interleukin receptor TIR domain 0.023
Further Details:      
 
Domain Number 5 Region: 1246-1294,1516-1579
Classification Level Classification E-value
Superfamily EF-hand 0.000000156
Family Calmodulin-like 0.051
Further Details:      
 
Domain Number 6 Region: 1878-1918,2009-2062
Classification Level Classification E-value
Superfamily EF-hand 0.0000386
Family Polcalcin 0.071
Further Details:      
 
Weak hits

Sequence:  164328.JGI73352
Domain Number - Region: 673-732
Classification Level Classification E-value
Superfamily Ankyrin repeat 0.00087
Family Ankyrin repeat 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI73352
Sequence length 2362
Comment (Phytophthora ramorum)
Sequence
MVGGESPTSDSTAANDSRRLHFGGHGAPRDPDESVNTQRSLRTPFVDSTARSDISSATYQ
LTQSPKNQQIWPPLQEIRRRHLANVQALHGKLAEVPRHWLMIRFLNNSFFARRLMRSGML
LTGGLFAGLVFYNVFVERWLSRHKDEDSDEYENCRSVANFSALIYQTLPAAIILSLPGSG
LRAFEPFKREDASGDEKPSEDSDEHSEEEVSSMAMIRRCFVFQLCEVLAVFMLLFDIGLV
LYFLYILLGGAISSCGSAATQIFALGAAACYGGLFTVLYYFTRYREHIKMQLGAFMETAQ
TGDLRKHVNLRADRKLNTTKKIIPVVRTRLYYATRRGDLHEMREILEYAKDKGLTSSEIG
FPRKIYAAPTIRWRFFARSSENPVHIAASLGNIRALELLREFEFDLAALDKVQRVVISTG
GFFWHFIQLVVKRPERSDEDSANSIFHTTLVTPLHCAVVTGQLETVRWLLERGAPPGTLA
QASFRSNRIPPLYLAEHGEIARELLLHGADPLVIPDPGYMNTMTPLQLAYVRGNYAVAQE
LEEWGSDVALTPFHLAAARNNVKAVRKFIARKTDVDCLGEMGYVGLNRRTPLHWAAISGS
AEAVKALLKGGADPNFQDVRGRSPLHWAAKLNKLEVVHLLLRAKADPNLVDSEYMTPLMC
AASALDASRELFSELTYAGGNIGYQLPITGDTALHVAVREENQESALAVLANGGDLMRMN
NEGLRPLDCTANTRLLFELKRAAGQRDVMISYTHSHLEFARKLRQSLEEANITTWLDLMD
PSGIGGGAVWREEIARGITNASIVLCILTEDYASSEWCLKELALAKQVGTPILAVSTEGA
IVDENMQVYLYTRQIIPFEPAIVDLRHDEGRVEYAYDESRYRSQFHLLLDGVRDEVEKHR
FFTRQNNVATSHRLDGGDADGGGERSNRGTMLQTLTDSLLSETTESASPNDWQEGGFVFL
SHGDKHKTFVHQLSSRLMDAGISCYSDRSIEGQDFYTRIQVAQETILRCSCFVVLVSKQT
MGNELVRDQLAFAEDKGRPIFPVVLNDLEPGLDKRYTLVRSELFHFMANGMSFKASFSQL
ANVLRQHCDVSQPDSDPEGIRNLSSMEGLEDTQVDLSSTCIRIGGIPGRVAFVDSCLHQT
DSVLFSGLSLRFAWWRRLWWKMQSNLAPAVTPRPVKGAAANARSGRTYALSASPMKVLGA
DAKAQAVIRPADSPIPSTLRKKPLILSGDIRNLGSNFQLATAREALSLTHLGDVFAAHGI
VITRAEAQALRHEFEENNDRGLSYVEFVDDLARSLRGPTTGTQDTGGPIESSGLVAGAAS
RALVKKPRLAEHLSRLSIRHTQLVGELRILLGANLRVSWAAVRDACRAADTGALGPGKLS
KPAFARLLAGLGIPALSTAALEELSQDGTTIDYHEFLAQFCSSFQHGDTNNVGNSLVFDR
PAGKAIAEVAVGSGANNITATNKTLQSPGVTGVLGGHSPKKVANQNASGLTALGKDPLLL
EQLRIVVGEKLSSRNAEIVATFAALDPTNLGSIPAAVFTQALRDLHLVDTEEEVATVLVA
SSGDHGKGNVDYRKFAASFGELTPSRGKPGAAAMTCSLQENSSLVFAGNKDVKGAHKNRV
ALSSPGNELKEAFSRLPDASWRAIHVELELSDPRKGGLVPPAELLRVLSKHLGPLPSRHF
GSLFRACGSHAHQLMDYRSLVKSYRPRVADTESFFTPPLQGEGAKGAIAVGRQHSQQATA
PTESLVLVWSVRVARARLGAVQWRALQDRLAACDPRRQGRVSTPAFALAVREVLSLTEAQ
TAFLCYFYEDRSVATDAPLIRYASFLTDYEDPGLEANDPNDLDDPNTQVASRAAGAAALM
SGGPSLGDTELDVGTELELLRQFFRAKVGELERMLVDVDADRRGFVSLPVFTRLCAKLSV
DAGTKWRETRATAKLFARYIARGGQFYYRGFLLDMDGKAGLQAQALVLQEDDEEDRIDGE
ERDKFMSIATKDRPLDVHEARVAIRHLMTTTRSQQNAVYKLLANMDPSGSGLLTYPELHR
ALERLGIQLRGDAVAQELLGFYEEEDARGERSTGQVKYLQLLHALGGRDPDKVGKDSSMS
DLSSHCSYYSAVGISPRAVRRSQAGIVASRQLTSRAGYVLAAQAVSHAVENPRAALNAGV
GATGGAGAVEQKLQKALQAQGKTAWKQLTRKLQALDNEHRGSVTPSSLRKVLGELGIELD
QEEIVRLQLKYDAEQNGRLNYHALLRQLTSALSDLGSSGGGGGDLLPSLSLTSPIKNKAS
GSESVPEDLRLGVQAKWKEVYASFKTLDKTNSGRVSAAHFRQLLDWYALSLTDSSFLAVL
RVFDSDDGLVDYNRFMRACFRG
Download sequence
Identical sequences H3GCW5
jgi|Phyra1_1|73352|fgenesh1_pg.C_scaffold_3000109 164328.JGI73352

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]