SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 164328.JGI76608 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  164328.JGI76608
Domain Number - Region: 283-305
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0153
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI76608
Sequence length 328
Comment (Phytophthora ramorum)
Sequence
MEQFAHLPPNQQDGLKKLMSLLGPEGVAHLASQGPDAINARLEAFSSYENALLEHLQQKM
TAVTAPTTPKPASDGAPRAKPLMVSVKTFEGKEGENLLLWIREVEMAMASAILQTEQQRV
ALAVSKLGGRAREWARTCGTSVDSAFPSWEQLKLQLSRVFSPPNQAYRKELVDFVQELRT
LIAGMAADPLPEAVTVTIFMGGLRTGVARTEVFRVHPTSFEEAVSVALNAEFNFKSARAG
WGTSQTNSSGAAGSSGGPEPMDLSHAEDKEAELLAAEQRIGIRRCFVCGSTQHLRPGCPL
RKQRQTPASRSPASYQKPGSWRGNVNAQ
Download sequence
Identical sequences H3GK48
164328.JGI76608 jgi|Phyra1_1|76608|fgenesh1_pg.C_scaffold_19000040

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]