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Domain assignment for 164328.JGI85597 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI85597
Domain Number 1 Region: 415-445
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000196
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI85597
Sequence length 647
Comment (Phytophthora ramorum)
Sequence
MQMVLEERELWEVTSGEVKLEHCTTTADQATFKRKSRKALAIICLAMEDSQLPLVRSAKD
AHDAWSRLEGHFEKKSLANKLFLRRRFFTTMMDEGDDVLEHINKLKTLAEQLDAVGAPVS
EDDLVITLLGSLSESYQFLITALESRADSLSWELVTSRLLHEDMKRKEQGGGGVDGAAHG
QGQAFMTRDNKRKGRPVKKAGAVVKKAPRAAAVYRGTTFNVEVKMQMVLEERELWEVTSG
EVKLEHCTTTADQATFKRKSRKALAIICLAMEDSQLPLVRSAKDAHDAWSRLEGHFEKKS
LANKLFLRRRFFTTMMDEGDDVLEHINKLKTLAEQLDAVGAPVSEDDLVITLLGSLSESY
QFLITALESRADSLSWELVTSRLLHEDMKRKEQGGGGVDGAAHGQGQAFMTRDNKRKGRP
VKKTGACHNCGKQGHWIAECPSRAQNDAERYRSQRANVAQDEEDPGDYLFSVGRTSSTAK
PSDMWLVDSGATQHMTSSNKYMRNYKTMAPVDVHLADDGVVQAVGTGDIVMSMKTPRGMK
KSVLTNVWHIPKLSRNLFSVGRFTKDVGPVTFESDGCFGLKWQLGTREGKGLFKLCMTPM
MPDEANAASSKDRQGDTTSYLWHLRLGHIGHGGLDAIVKKSYGVAST
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Identical sequences H3H4T3
164328.JGI85597 jgi|Phyra1_1|85597|fgenesh1_pg.C_scaffold_262000001

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