SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 164328.JGI85751 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI85751
Domain Number 1 Region: 1013-1106
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 0.00000000000000189
Family Reverse transcriptase 0.0099
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI85751
Sequence length 1372
Comment (Phytophthora ramorum)
Sequence
MAKEAKSAVPATPARSSGTRTEGSGRSGPSFATPSTLASINERSDSFDEPMDYSDAKEDD
EEDDLEEKAAMPELSEAAAVSAGRSGGVRSLARNLTEELNEVAGPEPANGYDEDGSNDHR
SSAMAEDANSRPNGGRPPLNGDTPAANRVLGRYLELMEVKSNWMRSFAPEVVRQAIWMEL
GGELTVPVESWSTRQVAEDTVQLLRAMGCEPQVFPSEADLRAWAPEEDAATALRKWKQKL
RSAFGVAEAGVSRPPNVRHASDPVDPSMIPLPLTPGRRPRGSTEAGIFSAQGATSTYFQD
SHMVTPRSVSRTERLAREAEGYRTAPIAGRSASRTPSRRYDLRDDPSDEDSFDVGDTGGD
LTGEWARQIRELSVVENDSATPRLEIATHLPLGNIKPYLGLRDKSEKSMQWLRAFIYEMK
GTHTPPNEWCMAFELSLQDGALHWYRQLPRKTRRTWKLLSDAFIKYYCSRSNQSAKARYY
SAKREEKEHVCDYLNRLNGYARNAGVQFEHGGRDAKDHVEHFLDSCEDRGLEERLCHVRV
KNIHDLEDMINDILRRRERKFGRESSVRRPRGQEVARRRDGGRSEDPRDGYRRDRRHRED
DRRREDRYRDDNRRRDDQQYRPRVTLTDALTNIVTALNAGRSADTRGGYPEVYNGGYDDT
EEYEPESHSGDDDRYSEGYSDDGYASTEDRGHVAAANDSERRNAAEGTFARADNRRPRAS
NGQRPYDRDDQRRNSTGRDGRRQYGPCAACGGLTHSAHYCFKRSGVRLDLFHGTARLPDE
VMVPLVKSQNPAEAEPYSMQVTGRPTEDLSVPGYQPPVVERRDYPTPRGILPRPSDDLGG
LDEGQITFADRSTEEPTERDRMPLTTTMRSSDEPVGGSWVGEDDDSVATDTSDGADTTYT
SEENSIPVLGDDPETRLDSAFVAMMHEITTGDGSGSGNTDTNTSEHLANEIELTDYAHEL
AFLPDLTEASETVLDYSGPNVLNPSATARQQERLVAVLKRHEKIMIASGNALPPPAYGVV
CDIDVQGHPPIKQRARRTPLRHLRKLYELLKGLLKARLVAFSDSPWASPIVIVLKKNGVD
IRLCIDYKLVNAVTAIMEYAMPSSGTRTEGSGRSGSSFATPSTLASINERSDSFDEPMDY
SDAKEDDEEDDLEEKAAMPELSEAAAVSAGCSGGVRSLARNLTEELNEVAGPEPANGYDE
DGSDDHRSPAMAEDANSRPNGGRPPLNGDTPAANRVLGRYLELMEVKSNWMRSFAPEVVR
QAIWMELGVFPSEADLRARAPEDAATALRKWKQKLRSAFGVAEAGVSRPPNVRHASDPVD
PSMIPLPLTPGRRPRESTEAGVFSAKSATSTYFQDSHMVTPRSVSLNGDRAS
Download sequence
Identical sequences H3H564
jgi|Phyra1_1|85751|fgenesh1_pg.C_scaffold_301000003 164328.JGI85751

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