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Domain assignment for 164328.JGI86131 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI86131
Domain Number 1 Region: 367-534
Classification Level Classification E-value
Superfamily Ribonuclease H-like 4.43e-44
Family Retroviral integrase, catalytic domain 0.0029
Further Details:      
 
Domain Number 2 Region: 101-132
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000249
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI86131
Sequence length 671
Comment (Phytophthora ramorum)
Sequence
MMDEGDDVLEHINKLKTLAEQLDAVGAPVSEDDLVITLLGSLSESYQFLITALESRADSL
SWELVTSRLLHEDMKRKEQGGGGVDGAAHGQGQAFMTRDNKRKGRPVKKTGACHNCGKQG
HWIAECPSRVHNDAERYRSQRANVAQDEEDPGDYLFSVGRTSSAAKPSDMWLVDSGATQH
MTSSSKYMRNYKKMAPVDVHLADDGVVQAVGTGDIVMSMKTPRGMKKGVLTNVWHIPKLS
RNLFSVGRFTKDVGPVTFESDGCFVDNKGLKWQLGAREGKGLFKLCMTPMMPDEANAASS
KDRQGDTTSYLWHLRLGHIGHGGLDAIVKKSYGVGIDMTSVKQWELCDGCALGKQTRVSY
MKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKF
AEFVAFAETQTGKRVQTLRSDNGGEYTSGVMAKFCADRGIVQKFTPPYTPQLNGVAERMN
RTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRAIGHDKSPHQVWTGKKPLLANL
KVFGCHAYVHVPKAKRTKFDARSVRCRFLGYSEHEKAYRFEELESSRVLVSRDAQFMEDV
FDSGRRDYHQREVVVIQDEETTDQDSSQSDEDDNEEEEEEEAARDEDFGPGNKRHPRTQS
LEEATEVPSAK
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Identical sequences H3H640
164328.JGI86131 jgi|Phyra1_1|86131|fgenesh1_pg.C_scaffold_478000002

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