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Domain assignment for 164328.JGI87135 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87135
Domain Number 1 Region: 283-432
Classification Level Classification E-value
Superfamily Ribonuclease H-like 4.93e-40
Family Retroviral integrase, catalytic domain 0.0032
Further Details:      
 
Domain Number 2 Region: 7-37
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000209
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87135
Sequence length 455
Comment (Phytophthora ramorum)
Sequence
MTRDNKRKGRPVKKTGACHNCGKQGHWIAECPSRVHNDAERYRSQRANVAQDEEDSGDYL
FSVGRTSSAAKPSDMWLVDSGATQHMTSSNKYMRNYKTMAPVDVHLADDGVVQAVGTGDI
VMSMKTPRGMKKGVLTNVWHIPKLSRNLFSVGRFTKDVGPVTFERDGCFADNKGLKWQLG
AREGKGLFKLCMTPMMPDEANAASSKDRQGDTTSYLWHLRLGHIGHGGLDAIVKKRYGVG
IDMTSVKQWELCDGCALGKQTRVSYMKSSPNRAKHRCVRPMQTPTFGGKRYFVTFIDDKS
HFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADRGIVQ
KFTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRAVSH
DKSPHQVWTGKKPLLANLKVFGCHAYVHVPKAKRT
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Identical sequences H3H8K8
164328.JGI87135 jgi|Phyra1_1|87135|fgenesh1_pg.C_scaffold_1601000001

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