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Domain assignment for 164328.JGI87230 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87230
Domain Number 1 Region: 272-439
Classification Level Classification E-value
Superfamily Ribonuclease H-like 5.06e-44
Family Retroviral integrase, catalytic domain 0.0031
Further Details:      
 
Domain Number 2 Region: 7-37
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000249
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87230
Sequence length 519
Comment (Phytophthora ramorum)
Sequence
MTRDNKRKGRPVKKTGACHNCGKQGHWIAECPSRVHNDAERYRSQRANVAQDEEDPGDYL
FSVGRTSSTAKPSDMWLVDSGATQHMTSSKTYMRNYKTMAPVDVHLADDGVAQAVGTGDI
VMSMKTPRGMKKGVLTNVWHIPKLSRNLFSVGRFTKDVGPVTFESDGCFADNKGLKWQLG
AREGKGLFKLCMTPMMPDEANAASSKDRQGDTTSYLWHLRLGHIGHGGLDAIVKKSYGVG
IDMTSVKQWELCDGCAVGKQTRVSYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFV
TFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKCVKTLRSDNGGEYTSGAMAKFC
ADRGIVQKFTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRC
PTRAISHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPKAKRTKFDARSVRCRFLGYSEHE
KAYRFEELESSRVLVSRDAQFMEDVFDSGRRDYHQREVV
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Identical sequences H3H8T3
164328.JGI87230 jgi|Phyra1_1|87230|fgenesh1_pg.C_scaffold_1699000001

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