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Domain assignment for 164328.JGI87633 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87633
Domain Number 1 Region: 187-312
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.77e-31
Family Retroviral integrase, catalytic domain 0.0033
Further Details:      
 
Domain Number 2 Region: 77-108
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000114
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87633
Sequence length 391
Comment (Phytophthora ramorum)
Sequence
MGIHAAVADWLKQLSIRLSESYQFLITALESRADSLSWELVTSRLLHEDMKRKEQGGGGV
DGAAHGQGQAFMVNNNKRKGRPVKKTGACHNCGKQGHWIAECPSRVHNDAERYRSQRANV
AQDEEDPGDCLFSVGRTSSTAKPSDMWLVDSGATQHMTSSKTYMRNYKTMAPVDVHLADD
GVVQAVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADHGIVQKFTPPYTP
QLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRAISHDKSPHQVW
TGKKPLLANLKVFGCHAYVHVPKAKRTKFDARSVRCRFLGYSEHEKAYRFEELESSRVLV
SRDAQFMEDVFDSGRRDYHQREVVVDGRYGS
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Identical sequences H3H9T3
jgi|Phyra1_1|87633|fgenesh1_pg.C_scaffold_2284000001 164328.JGI87633

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