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Domain assignment for 164328.JGI87644 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87644
Domain Number 1 Region: 353-566
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 0.00000000000912
Family Reverse transcriptase 0.047
Further Details:      
 
Domain Number 2 Region: 40-67
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000837
Family Retrovirus zinc finger-like domains 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87644
Sequence length 614
Comment (Phytophthora ramorum)
Sequence
MSSAELRSQDVVKVLTNEHIKRQGEKTATVKTEDAAKAFNTDRESRQCTYCGKLGHTIDK
CWTKQKDENRGPRRGGNGNGRGRGANNAQWRNDDASYDYGYGYDRVAFAASLECGISTGK
DMLGMWAVDSGATHHICNDKAKFAHLIERNEGELSVADGNKAAIMGVGTIVEQVVLPNGD
ERDIEIKNALYVPSMSKNLLSVPQINKSGLFQVVFDGTEMRVAHKASKQVVAAANLVDGL
YWLQTPQRSANAATSGKTVDLHARMGHAPVEVLRKMIDNDMIKDAKAPSKSSGPSVCRGL
FWRASANAVEAAADLSEPTTFQEAVNGPDQVHWRKAIRAELKSMRLRGVFRAAKLPSGQR
AIGTKWVFKIKRKADGSIQKYKARLVAKGFKQKYGIDYTETFSPVVKYVTLRMIIAIAKY
FGWPLDQLDVVTAFLYGVMKEVVFCVVPEGAELDGGFDCLELVKAIYGLKQASRVWNETF
DEFMCSIGFQVSAFDPCLYNKVVDGHCVLVLVYVDDVLITGSSPELISRTKTDLKTRFEM
TDSGKCAFVLGIELVDGPDGSVTMCQRRYVDDILKRFAMDECKAVVSPVDMSTRLVPSDA
ATKVTLRFAKLLVR
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Identical sequences H3H9U3
164328.JGI87644 jgi|Phyra1_1|87644|fgenesh1_pg.C_scaffold_2306000001

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