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Domain assignment for 164328.JGI87657 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87657
Domain Number 1 Region: 233-263
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000017
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 
Domain Number 2 Region: 404-431
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000523
Family Retrovirus zinc finger-like domains 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87657
Sequence length 639
Comment (Phytophthora ramorum)
Sequence
MSPSPVFPAQDPDYAFAMDATPTTTARINKFNGTNFHTWKFKMQMVLEERELWEVTSGEV
KLEHCTTTADQATFKRKSRKALAIICLAMEDSQLPLVRSAKDAHDAWSRLEGHFEKKSLA
NKLFLRRRFFTTMMDEGDDVLEHINKLKTLAEQLDAVGAPVSEDDLVITLLGSLSESYQF
LITALESRADSLSWELVTSRLLHEDMKRKEQGGGGVDGAAHGQGQAFMTRDNKRKGRPVK
KTGACHNCGKQGHWIAECPSRVQNDAERYRSQRANVAQDEEDPGDYLFSTLYGGSQKAGR
IYLKRQLFSMEMSEGGNVLHHCNEVLNINAKLSSIGAKMEDEDVAICLLRSLPKSYENVV
LNLEMSSAELRSQDVVKVLTNEHIKRQGEKTATVKTEDAAKAFNTDRESRQCTYCGKLGH
TIDKCWTKQKDENRGPRRGGNGNGNGRGRGANNAQWRNDDASYDYGYDRVAFAVSLECGI
STGKDMLGMWAVDSGATHYICNDKAKFAHLIERNEGELSVADGNKAAIMGVGTIVERVVL
PNGDERDIEIKNALYVPSMSKNLLSVPQINKSGLFQVVFDGTQMRVAHKASKQVVAAANL
VDGLYWLQMPQRSANAATSGKTVDLHARMGHAPVECFAR
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Identical sequences H3H9V6
jgi|Phyra1_1|87657|fgenesh1_pg.C_scaffold_2336000001 164328.JGI87657

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