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Domain assignment for 164328.JGI87906 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI87906
Domain Number 1 Region: 403-565
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.08e-27
Family Retroviral integrase, catalytic domain 0.0085
Further Details:      
 
Domain Number 2 Region: 84-128
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000244
Family Retrovirus zinc finger-like domains 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87906
Sequence length 570
Comment (Phytophthora ramorum)
Sequence
MTHLRQQLRNVGSEHAISDDEMARLLLMGVAMTHRELVEQFDLPTRQGNPPTLQQVTNAL
RSRDERDRMANRSQAGQDGGIVMNMNGGGGSGSQGGRSGRKSLPKCYHCKKPGHLKRDCY
QYKNKHAKVKANQSKEVKKKAWSKDKTKQEPGIIEHMEFLNDGDEDSSSSEDDVMVGMVQ
PATVSKNASEWMLDTGTSTHVCINRDSFVTQKQSKTMFKVWDGQVTRGVMSGQVVIYTKN
QNIAGLVKLELSNVEYSPRGSVNLISLGVMEDNGWEMSSSPNGESPRKIFLEQPKAHKRL
VFVKRGKHYWLKTVEFDVLDTGMAMMTVNADANELMLWHERLGHLHVAAIKHMVDNKSVA
GMKIPVALFKKPFSCLSCMSAKRKRMSYKASAAEKRTKVNYERLTSDTCEMGKFLPGLGN
VRYFQLIHDEGSRYKWCFPLKNKSDANANTIKLITELLAAGHKIKSFTSDGGGEFVNSEL
KLFMQTRGIRFVPTHPYTPEENALVEKLNGVLVNKMRAAMHAADLPNRLWPEVLQYIVDI
DNMSPTRALKGKTPSEKLLGTVPNVAKEEA
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Identical sequences H3HAI1
jgi|Phyra1_1|87906|fgenesh1_pg.C_scaffold_2835000001 164328.JGI87906

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