SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for 164328.JGI87935 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI87935
Domain Number 1 Region: 8-34
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000161
Family Retrovirus zinc finger-like domains 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI87935
Sequence length 119
Comment (Phytophthora ramorum)
Sequence
DAAKAFNTDRESRQCTYCGKLGHTIDKCWTKQKDENRGPRRGGNGNGRGRGANNAQWRND
DASYDYGYGYDRVAFAVSLECGISTGKDMLGMWAVDSGATHHICNDKAKFAHLIERNVV
Download sequence
Identical sequences H3HAK7
jgi|Phyra1_1|87935|fgenesh1_pg.C_scaffold_2886000001 164328.JGI87935

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]