SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 216595.PFLU1164 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  216595.PFLU1164
Domain Number 1 Region: 271-568
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 2.22e-83
Family DNA repair protein MutS, domain III 0.0000000393
Further Details:      
 
Domain Number 2 Region: 572-799
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.16e-58
Family ABC transporter ATPase domain-like 0.0000000572
Further Details:      
 
Domain Number 3 Region: 6-119
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 1.83e-43
Family DNA repair protein MutS, domain I 0.00000362
Further Details:      
 
Domain Number 4 Region: 118-270
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 1.57e-41
Family DNA repair protein MutS, domain II 0.00001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 216595.PFLU1164
Sequence length 863
Comment (Pseudomonas fluorescens SBW25)
Sequence
MSKNTSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQSIPMCGIPYHSLEGYLVKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLSVLDITSGNFSVLEIKGWENLLAELERINPVELL
IPDDWPKDLPAEKRRGTKRRAPWDFERDSALKSLCQQFSVQDLKGFGCETLTLAIGAAGC
LLGYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLTVLQARQTSITCLLDGYRFEKLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALGALPQLQVAMTELDTPHLQQLAVTAGTYPELAALLEKAIIDNPPA
IIRDGGVLKTGYDSELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIEL
PSKQAESAPIDYQRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLIS
QLAPLQDTAAALAELDVLSNLAERALNLDLNCPRFVSEPCMRIVQGRHPVVEQVLTTPFV
ANDLSLDDDTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH
LRAYTLFATHYFELTVLPESEPLVTNVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPNDVITRAREHLSRLETTALPHETVVASPTKATSKPAAPHQSDMFASLPHPVLDELA
KLDLDGLTPRKALEMLYALQVRI
Download sequence
Identical sequences A0A1I7H521 C3KCT2
WP_012722497.1.23922 WP_012722497.1.48276 216595.PFLU1164 gi|229588703|ref|YP_002870822.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]