SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 220664.PFL_0641 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  220664.PFL_0641
Domain Number 1 Region: 30-408
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.03e-91
Family L-arabinose binding protein-like 0.00000324
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 220664.PFL_0641
Sequence length 421
Comment (Pseudomonas fluorescens Pf-5)
Sequence
MKRRSLLKAFTLTASIAAMGMTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDE
INAKGGVNGKLLEPVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE
LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPR
TTNKILRSFLHSKSVADKDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
PFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFESVDNPVNQKFVAA
WKAYAKAKNLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQTFAAPS
GYTLTMDKTNHHLHKPVMIGEIQPDGQFNVVWQTEGPIRAQPWSPFIPGNDKKPDYAVKS
N
Download sequence
Identical sequences Q4KJ00
220664.PFL_0641 gi|70734143|ref|YP_257783.1| WP_011059009.1.14038 WP_011059009.1.18072 WP_011059009.1.42693

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]