SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 234621.RER_45790 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  234621.RER_45790
Domain Number 1 Region: 185-443
Classification Level Classification E-value
Superfamily Cryptochrome/photolyase FAD-binding domain 5.36e-94
Family Cryptochrome/photolyase FAD-binding domain 0.000000291
Further Details:      
 
Domain Number 2 Region: 2-156
Classification Level Classification E-value
Superfamily Cryptochrome/photolyase, N-terminal domain 1.02e-36
Family Cryptochrome/photolyase, N-terminal domain 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 234621.RER_45790
Sequence length 444
Comment (Rhodococcus erythropolis PR4)
Sequence
MVWFRRDLRVGDLPILSAASDAGGRTLGLFVLDENLLGPAGSPRQDQLFANLTALDHQLD
GKLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEQVELIATGSPYAVAP
GRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAQTVRWFDPSDKEGGPRRVSIPAPSAS
VSDFVGEVGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLADLSK
RLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAWCEGK
TGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARFFMSHLVDGDLASNQH
GWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAMRPVD
YPDPIVDHAHEREEALRRYGEIKG
Download sequence
Identical sequences C0ZMM9
234621.RER_45790 gi|226308066|ref|YP_002768026.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]