SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 264730.PSPPH_0508 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  264730.PSPPH_0508
Domain Number 1 Region: 52-459
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 6.28e-133
Family TK-like PP module 0.000000000133
Further Details:      
 
Domain Number 2 Region: 465-692
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 3.14e-97
Family TK-like Pyr module 0.0000000508
Further Details:      
 
Domain Number 3 Region: 695-879
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 1.3e-59
Family Transketolase C-terminal domain-like 0.00000172
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 264730.PSPPH_0508
Sequence length 881
Comment (Pseudomonas syringae phaseolicola 1448A)
Sequence
MQDLDPVETQEWLDALESVLDKEGEDRAHYLMTRLGELATRSGSQLPYAITTPYRNTIPV
THEARMPGDLFMERRIRSLVRWNALAMVVKTNLNDPDLGGHISSFASSATLYDIGFNYFF
QAPTDEHGGDLIYFQGHASPGVYARAFLEGRITEDQMNNFRQEVDGNGLSSYPHPWLMKD
FWQFPTVSMGLGPIQAIYQARFMKYLEHRGYIPEGKQKVWCFLGDGETDEPESLGAIALA
GRENLDNLIFVVNCNLQRLDGPVRGNAKIIQELEGVFRGAQWNVTKVIWGRFWDPLLAKD
VDGILQRRMDEVIDGEYQNYKAKDGAFVREHFFNSPELKAMVADLSDDEIWKLNRGGHDP
YKVYAAYHEAVNHKGQPTVVLAKTIKGYGTGAGEAKNTAHNTKKVDVDSLRHFRDRFDIP
VKDSELEALPFYKPEEGSAEARYLSERRAALGGFVPQRRAQSFSLPTPPLDTLKAILDGS
GDREISTTMAFVRILAQLVKDKEVGQRIVPIIPDEARTFGMEGMFRQLGIYSSVGQLYEP
VDKEQVMFYREDKKGQILEEGINEAGAMSSFIAAGTSYSSHNQPMIPFYIFYSMFGFQRI
GDLAWAAGDSRTRGFLIGGTAGRTTLNGEGLQHEDGHSHILASTIPNCRTFDPTYGYELA
VIIQDGMRRMFEEQQDVFYYLTVMNESYTQPAMPVGAEEGIVKGMYLLEEDTREAAHHVQ
LLGSGTILREVREAAKILRDEFNIGADVWSVTSFNELRRDGLAVEHNNRLHPGQKPELSY
VQQCLNGRKGPVIASTDYMKLFADQIRQWVPTKEYKVLGTDGFGRSDSRKKLRHFFEVDR
HFVVLAALEALADRGDIEPKVVAEAIAKFGIDPEKRNPLDC
Download sequence
Identical sequences A0A0N0F2M3 A0A1E3XZE0 Q48P59
WP_011167522.1.10739 WP_011167522.1.12791 WP_011167522.1.27185 WP_011167522.1.28195 WP_011167522.1.70455 WP_011167522.1.86037 264730.PSPPH_0508 gi|71735799|ref|YP_272810.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]