SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 279238.Saro_0965 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  279238.Saro_0965
Domain Number 1 Region: 308-477
Classification Level Classification E-value
Superfamily MgtE membrane domain-like 3.79e-44
Family MgtE membrane domain-like 0.000099
Further Details:      
 
Domain Number 2 Region: 40-165
Classification Level Classification E-value
Superfamily MgtE N-terminal domain-like 1.7e-30
Family MgtE N-terminal domain-like 0.0011
Further Details:      
 
Domain Number 3 Region: 167-300
Classification Level Classification E-value
Superfamily CBS-domain pair 4.04e-28
Family CBS-domain pair 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 279238.Saro_0965
Sequence length 481
Comment (Novosphingobium aromaticivorans DSM 12444)
Sequence
MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYN
LVEPLHPADIADLFELIDQNDRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVAD
LAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESALSYPEETAGRLMSRDLIAVP
EAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ
TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGA
GDGDINEPIRLTVQTRLTWLVVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGN
AGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTALGLLIGCGTALLFGNPLLGS
VIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL
A
Download sequence
Identical sequences Q2G9R3
279238.Saro_0965 WP_011444624.1.26809 WP_011444624.1.96002 gi|87198987|ref|YP_496244.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]